TOPICCONFERENCEAUTHOR
2017
Development and evaluation of Galaxy based one-click multi stage database searching pipeline for proteogenomics analysisBICB @ Rochester,MNP.Kumar
A Galaxy-based, multi-staged, two-step searching pipeline for improved peptide identification in next generation proteomic studiesASMS @ Indianapolis,INP.Kumar
Enhancing The Multi-Omics Visualization Platform (MVP) Plug-In For Galaxy-Based ApplicationsASMS @ Indianapolis,INT.McGowan
Multi-omic informatics in the cloud: Galaxy-P takes a ride on JetstreamASMS @ Indianapolis,INT.Griffin
Galaxy-Centered Lab Workflows To Organize Metabolomic AnalysesASMS @ Indianapolis,INA.Eschenlauer
Functional analysis of microbiomes by metaproteomics withing Galaxy frameworkASM @ New Orleans,LAP.Jagtap
2016
From Start to Finish: a complete proteogenomic informatics environment implemented in the Galaxy platformASMS @ San Antonio, TXG.Onsongo
A Multi-omics Visualization Platform (MVP) Plug-in for Galaxy-based applicationsASMS @ San Antonio, TXT.McGowan
Complementary ERLIC and RPLC online separations significantly expand sequence coverage in MS-based Proteomic and Protegenomic StudiesASMS @ San Antonio, TXC.Guerrero
Galaxy-P: Recent developments and emerging applicationASMS @ San Antonio, TXT.Griffin
2015
Democratizing and expanding the reach of DIA Mass spectrometry: Developing OpenSwath tools and workflows within user-friendly Galaxy-P platformASMS @ St.Louis, MOP.Jagtap
Metaproteomic analysis of human cervical-vaginal fluid in residual Pap tests: Insights into the cervical microbiomeASMS @ St.Louis, MOT.Griffin
Revealing Pathways In COPD-Associated Lung Cancer Via Large-Scale Quantitative Multi-omic AnalysisASMS @ St.Louis, MOB.Sandri
Plugging Proteomics Peptide-Spectral -Match visualization infor GalaxyASMS @ St.Louis, MOJ.Johnson
2014
Flexible, accessible and reproducible workflows for Tandem proteogenomic and metaproteomic analysis using GalaxyP platformASMS @ Baltimore, MDP.Jagtap
The Galaxy framework as a unifying bioinformatics solution for ‘Omics’ core facilitiesABRF @ Alburquerque, NMP.Jagtap
Identifying Novel Peptide Sequence Variants from High Throughput RNA-Seq Data Via Flexible Proteomic Database Generation using the Galaxy FrameworkASMS @ Baltimore, MDJ.Johnson
Community-Based development and evaluation of biological mass spectrometry software via the Galaxy tool shedASMS @ Baltimore, MDB.Gottschalk
2013
An Integrated Systems biology platform for complete proteogenomic analysisASMS @ Minneapolis, MNP.Jagtap
Reproducible Proteomic workflows using extensions to the Galaxy frameworkASMS @ Minneapolis, MNJ.Johnson
Quantitative Analysis of the C2C12 and Mouse Skeletal Muscle Proteomes using a Multiplexing StrategyASMS @ Minneapolis, MNM.Henderson
Building Proteomic Application Platforms for Cloud Computing Environments with CloudBioLinuxASMS @ Minneapolis, MNJ.Chilton
A comprehensive characterization of the pig islet proteome: PTMs, amino acid substitutions and novel isoformsASMS @ Minneapolis, MNE.Jong
Automated Quantification and Analysis of SILAC-iTRAQ Dual-labeled DataASMS @ Minneapolis, MNG.Onsongo
Galaxy-P: Transforming MS-based proteomic informatics via innovative workflow development, dissemination, standardization and transparencyASMS @ Minneapolis, MNT.Griffin
TOPICCONFERENCEPRESENTER
2017
Metaproteomics for the future: Democratizing functional analysis of microbiomes via community based informatics development and disseminationASMS @ Indianapolis,INP.Jagtap
Metaproteomics for the future: Functional microbiome analysis community based informatics development and disseminationIMS @ Sardignia,ItalyP.Jagtap
Advancing metaproteomics research via comminity based informatics development and disseminationGCC@ Montepelier, FranceP.Jagtap
ProteogenomicsPersistent @ Pune,IndiaP.Jagtap
2016
Proteogenomics in Galaxy: Identifying Novel ‘Constellations’ of Proteoforms using Transcriptomic and Proteomics DataGCC @ Bloomington,INP.Jagtap
New biochemical discoveries made possible by multi-omicsUW@LaCrosse,WIT.Griffin
Embracing complexity and diversity: Metaproteomics within the Galaxy frameworkGCC @ Bloomington,INP.Jagtap
The Galaxy platform for Multi-omic data analysis and InformaticsABRF @ Fort Lauderdale,FLD.Clements
Embracing complexity and diversity: Discovery Metaproteomics of multiple microbiomes using the Galaxy frameworkASMS @ San Antonio, TXP.Jagtap
2015
Search GUI and Peptide Shaker deployed in the Galaxy framework: A powerful informatics platform for protein identification and beyondASMS @ St.Louis, MOI.Cooke
Proteomics data analysis using Galaxy-PCMSP @ FerringtonP.Jagtap
Galaxy-Based Peptide Shaker tools and applications with a focus on downstream applicationsASMS @ St.Louis, MOI.Cooke
The Galaxy framework as a bioinformatics solution for proteomics and multi-omics studiesASMS @ St.Louis, MOP.Jagtap
Proteogenomics and Metaproteomics using the Galaxy PlatformMultiomics_Talks @ IndiaP.Jagtap
Proteogenomics and Metaproteomics using the Galaxy PlatformMultiomics_Talks @ IICT,IndiaP.Jagtap
Proteogenomics and Metaproteomics using the Galaxy PlatformMultiomics_Talks @ Delhi, IndiaP.Jagtap
2014
Public Sharing Of Complex MS-Based Qualitative And Quantitative Proteomic Data Analysis Workflows: Adding Value To Big Data RepositoriesASMS @ Baltimore, MDT.Griffin
The Galaxy framework as a unifying bioinformatics solution for ‘omics’ core facilitesABRF @ Alburquerque, NMP.Jagtap
Large scale multi-omic data integration and analysis: Challenges and OppurtunitiesBICB @ Rochester,MNT.Griffin
Metaproteomics: and opportunity-rich complement to metagenomicsMetagenomics Supergroup @ Minneapolis,MNT.Griffin
DIA : Learnings from AlburqurqueABRF @ Alburquerque, NMT.Griffin
The Galaxy framework as a unifying bioinformatics solution for Multi-omic data analysisGCC @ TwinCities,MNP.Jagtap
2013
Galaxy-P Update:Project-Based Approach to Developing resources for Proteomics Research MSI @ Minneapolis,MNP.Jagtap
2012
Galaxy-P for ProteomicsGCC @ Chicago,ILP.Jagtap